Welcome to the PATHACT documentation wiki!

PathAct is an interactive working environment to assay in silico the effect of knock-out and over-expression experiments in the signaling pathways. The knock out of a gene can be done for this single gene, or following the pattern established by the action of a drug targeting the desired gene.

Along this tutorial you will learn how to use the PathAct web tool and find different worked examples.

• What can PathAct do for you

• How to cite PathAct

• How to use PathAct:
  • Logging in
  • Upload your data
  • Workflow
  • Results

• Data matrix expression file

• Worked examples:
  • Worked example
  • Worked example 2
  • Worked example 3

• For further learning:
  • Worked example 3