====== Welcome to PathAct! ======

Welcome to the PATHACT documentation wiki!

PathAct is an interactive working environment to assay //in silico// the effect of knock-out and over-expression experiments in the signaling pathways. The knock out of a gene can be done for this single gene, or following the pattern established by the action of a drug targeting the desired gene.

Along this tutorial you will learn how to use the PathAct web tool and find different worked examples.

  * [[What can do PathAct for you|What can PathAct do for you]]

  * [[How to cite PathAct|How to cite PathAct]]

  * How to use PathAct:
    * [[Logging in|Logging in]]
    * [[Upload your data|Upload your data]]
    * [[Workflow|Workflow]]
    * [[Results|Results]]

  * [[Data matrix expression file|Data matrix expression file]]

  * Worked examples:
    * [[Worked example|Worked example]]
    * [[Worked example2|Worked example 2]]
    * [[Worked example4|Worked example 3]]

  * For further learning:
    * [[Worked example3|Further learning]]