Differences

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--- what_can_do_hipathia_for_you [2015/12/18 13:48] – created mhidalgo
+++ what_can_do_hipathia_for_you [2017/05/24 15:27] (current) – external edit 127.0.0.1
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 ===== Differential signaling =====
-HiPathia allows us to compute a signal value for each signaling path and each of our data samples. Therefore, it allows us to **compare** the signal value:
+HiPathia allows us to compute a signal value for each signaling path and each of our data samples.
+Therefore, it allows us to **compare** the signal value:
   * Between two groups, in order to see which signaling paths change and how, or
   * With a continuous value, giving us the correlation of each signaling path with this variable.
-HiPathia is able to integrate **variant files** in order to compute a more accurate estimation of the samples expression. This integration can be done in order to:
+HiPathia is able to integrate **variant files** in order to compute a more accurate estimation of the samples expression.
+This integration can be done in order to:
   * Have a more precise expression profile of the samples we are comparing, or
   * Check the effect on the signaling pathways of the mutations in the genome.
+In order to check how to use these options please see [[how_to_use_hipathia|How to use HiPathia]].
+===== Prediction =====
+HiPathia allows us to train, download and test a prediction model for our dataset. The model can be trained either to:
+  * Discriminate between two different groups of samples, or
+  * Predict the value of an unknown variable.
+In order to check how to use these options please see [[how_to_use_hipathia|How to use HiPathia]].